Spatial Transcriptome

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Gain deeper insights into tissue structure and organization by adding spatial information to your genomics data. By showing which expression profiles occur where, spatial transcriptomics enables you to create detailed maps of healthy and diseased tissue based on mRNA sequence data.

Spatial Transcriptome

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Book your free consultation

Now, if you like what you read or you have any extra questions, you can book a free online meeting to discuss your project with our consultants. Tell us about your project and we will get the correct consultant for you.

Many transcriptome studies greatly benefit from spatial information. Macrogen Europe’s spatial transcriptomics service uses 10x Genomics Visium technology to help you create precise mRNA expression maps of your tissue slides.

Our service works as follows: You send us your blocks of formalin-fixed, paraffin-embedded (FFPE) tissue. We will use 10x Visium technology to barcode the mRNA present on the slide in a location-specific manner. We then prepare the libraries and sequence the samples – with the barcodes ensuring that each sequence can be traced back to a location on the slide.

This technology enables you to get an unprecedented view of the organization of complex tissues by combining histology with spatial mRNA sequencing data. It can also deliver unique data on disease progression, for example, the way in which new mutations appear and organize in cancer tissue.

Book your free consultation

Now, if you like what you read or you have any extra questions, you can book a free online meeting to discuss your project with our consultants. Tell us about your project and we will get the correct consultant for you.

Book your free consultation

Now, if you like what you read or you have any extra questions, you can book a free online meeting to discuss your project with our consultants. Tell us about your project and we will get the correct consultant for you.

Looking for more library kits? Ready to run samples?

You can have a look to the list of all library kits available and the Macrogen Europe sample criteria. RTR samples? You can also find the library criteria in case your sample are ready for sequencing.

Library kits

Our partnership with 10X Genomics and Singleron has you covered. Reach us and tell us about your project, and we will guide you to get the best sequencing configuration for your project needs.

Book your free consultation

Now, if you like what you read or you have any extra questions, you can book a free online meeting to discuss your project with our consultants. Tell us about your project and we will get the correct consultant for you.

Looking for more library kits? Ready to run samples?

You can have a look to the list of all library kits available and the Macrogen Europe sample criteria. RTR samples? You can also find the library criteria in case your sample are ready for sequencing.

Sequencers

  • Illumina
  • NovaSeq X
  • NovaSeq 6000
  • NextSeq
  • PacBio
  • Revio
  • PacBio Sequel IIe
  • Oxford Nanopore
  • PromethION

Book your free consultation

Now, if you like what you read or you have any extra questions, you can book a free online meeting to discuss your project with our consultants. Tell us about your project and we will get the correct consultant for you

Book your free consultation

Now, if you like what you read or you have any extra questions, you can book a free online meeting to discuss your project with our consultants. Tell us about your project and we will get the correct consultant for you.

Looking for more library kits? Ready to run samples?

You can have a look to the list of all library kits available and the Macrogen Europe sample criteria. RTR samples? You can also find the library criteria in case your sample are ready for sequencing.

Yes, we have bioinformatics in-house

Knowing the purpose of your research is essential to establish the correct sequencing configuration and statistic analysis. Let us know what is the objective of your research and we will guide you in getting the correct bioinformatics services.

From Raw Data to Customized services

For most researchers obtaining RAW data is sufficient for their research. However, Macrogen Europe is also ready to provide bioinformatic analysis for your project.

We are working to provide you with some examples of the type of graphs and analysis for Spatial Transcriptome Sequencing.

Yes, we have bioinformatics in-house

Knowing the purpose of your research is essential to establish the correct sequencing configuration and statistic analysis. Let us know what is the objective of your research and we will guide you in getting the correct bioinformatics services.